Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.62■□□□□ 0.41
O00370 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.62■□□□□ 0.41
O00370 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.62■□□□□ 0.41
O00370 AC112191.1-201ENST00000523689 701 ntBASIC17.62■□□□□ 0.41
O00370 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.62■□□□□ 0.41
O00370 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.62■□□□□ 0.41
O00370 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.62■□□□□ 0.41
O00370 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.62■□□□□ 0.41
O00370 MTDHP5-201ENST00000598980 586 ntBASIC17.62■□□□□ 0.41
O00370 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
O00370 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
O00370 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
O00370 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
O00370 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
O00370 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
O00370 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.62■□□□□ 0.41
O00370 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
O00370 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.62■□□□□ 0.41
O00370 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.61■□□□□ 0.41
O00370 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
O00370 AC103702.1-201ENST00000548801 2630 ntBASIC17.61■□□□□ 0.41
O00370 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.61■□□□□ 0.41
O00370 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.61■□□□□ 0.41
O00370 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 FAM58CP-201ENST00000435741 640 ntBASIC17.61■□□□□ 0.41
O00370 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
O00370 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.61■□□□□ 0.41
O00370 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.61■□□□□ 0.41
O00370 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
O00370 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.61■□□□□ 0.41
O00370 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
O00370 AL078644.1-201ENST00000609881 752 ntBASIC17.61■□□□□ 0.41
O00370 C20orf181-201ENST00000623918 480 ntBASIC17.61■□□□□ 0.41
O00370 AC092902.6-201ENST00000641783 218 ntBASIC17.61■□□□□ 0.41
O00370 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.61■□□□□ 0.41
O00370 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.61■□□□□ 0.41
O00370 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
O00370 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
O00370 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.61■□□□□ 0.41
O00370 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
O00370 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.6■□□□□ 0.41
O00370 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
O00370 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
O00370 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.6■□□□□ 0.41
O00370 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
O00370 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
O00370 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 BX842568.4-201ENST00000421222 227 ntBASIC17.6■□□□□ 0.41
O00370 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.6■□□□□ 0.41
O00370 ALG1L5P-201ENST00000482043 771 ntBASIC17.6■□□□□ 0.41
O00370 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.6■□□□□ 0.41
O00370 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.6■□□□□ 0.41
O00370 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.6■□□□□ 0.41
O00370 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
O00370 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.6■□□□□ 0.41
O00370 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.6■□□□□ 0.41
O00370 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.6■□□□□ 0.41
O00370 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms