Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC162PA2VCL2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC162PA2VCL2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC162PA2VCL2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 PMS2P4-201ENST00000412466 1052 ntBASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 AC140113.2-201ENST00000604370 208 ntBASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 AC021097.1-201ENST00000607902 574 ntBASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 AC020765.3-201ENST00000613051 740 ntBASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 LINC01144-201ENST00000626198 1710 ntBASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 AC068418.2-201ENST00000577309 3703 ntBASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC162PA2VCL2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 MED15P5-201ENST00000423150 992 ntBASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 MIR3909-201ENST00000579518 119 ntBASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 AC027601.4-201ENST00000611259 610 ntBASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 AL513190.1-201ENST00000621254 727 ntBASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC162PA2VCL2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms