Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 RFPL4AP1-201ENST00000530883 850 ntBASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 HLA-A-202ENST00000376806 1854 ntBASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 AC026691.1-201ENST00000602502 2017 ntBASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKIPSDQ9NZQ3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 AL645728.1-201ENST00000366221 2101 ntBASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 AL590787.1-201ENST00000568856 1315 ntBASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 FAM58CP-201ENST00000435741 640 ntBASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 CYMP-203ENST00000474680 1263 ntBASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 AC068137.2-201ENST00000605408 478 ntBASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKIPSDQ9NZQ3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms