Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 MIR648-201ENST00000385046 94 ntBASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 AL591424.1-201ENST00000442569 1213 ntBASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 AC106730.1-201ENST00000566722 1090 ntBASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 AC007967.2-201ENST00000432613 625 ntBASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 AC074386.1-202ENST00000463561 864 ntBASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 PDPK2P-202ENST00000562415 1191 ntBASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 AC018845.2-201ENST00000568326 409 ntBASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDLIM5Q96HC4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms