Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 GPALPP1-207ENST00000611650 899 ntBASIC14.88□□□□□ -0.03
CPNE4Q96A23 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 AC006538.3-201ENST00000612495 578 ntBASIC14.88□□□□□ -0.03
CPNE4Q96A23 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 AC139530.3-201ENST00000620344 690 ntBASIC14.88□□□□□ -0.03
CPNE4Q96A23 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE4Q96A23 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE4Q96A23 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 AC022211.2-201ENST00000585075 2527 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 TFAMP1-201ENST00000412727 736 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 ADH5P3-201ENST00000433842 1137 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 SPDYE11-202ENST00000450699 704 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 AP000344.2-201ENST00000512987 629 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 AL135744.1-201ENST00000565098 629 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 SPDYE9P-201ENST00000570642 692 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 SPDYE10P-202ENST00000612005 668 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 SPDYE8P-202ENST00000612377 668 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 AC134684.3-201ENST00000641758 218 ntBASIC14.87□□□□□ -0.03
CPNE4Q96A23 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CPNE4Q96A23 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE4Q96A23 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 AC254562.1-201ENST00000417586 456 ntBASIC14.86□□□□□ -0.03
CPNE4Q96A23 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 AC020765.3-201ENST00000613051 740 ntBASIC14.86□□□□□ -0.03
CPNE4Q96A23 AL691403.2-201ENST00000618460 490 ntBASIC14.86□□□□□ -0.03
CPNE4Q96A23 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms