Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 AL513523.2-202ENST00000427283 2040 ntBASIC14.53□□□□□ -0.08
TMEM54Q969K7 AC026691.1-201ENST00000602502 2017 ntBASIC14.53□□□□□ -0.08
TMEM54Q969K7 AL596087.1-201ENST00000400979 1969 ntBASIC14.53□□□□□ -0.08
TMEM54Q969K7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 AL355306.1-201ENST00000415580 579 ntBASIC14.53□□□□□ -0.08
TMEM54Q969K7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 C20orf181-201ENST00000623918 480 ntBASIC14.53□□□□□ -0.08
TMEM54Q969K7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 AL391005.1-201ENST00000623953 2435 ntBASIC14.52□□□□□ -0.08
TMEM54Q969K7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM54Q969K7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TMEM54Q969K7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 YBX2P1-201ENST00000394192 760 ntBASIC14.52□□□□□ -0.09
TMEM54Q969K7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 TFAMP1-201ENST00000412727 736 ntBASIC14.52□□□□□ -0.09
TMEM54Q969K7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 ADH5P3-201ENST00000433842 1137 ntBASIC14.52□□□□□ -0.09
TMEM54Q969K7 MKNK2P1-201ENST00000437526 628 ntBASIC14.52□□□□□ -0.09
TMEM54Q969K7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 PRYP6-201ENST00000514804 343 ntBASIC14.52□□□□□ -0.09
TMEM54Q969K7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 FAM86C2P-203ENST00000528684 1004 ntBASIC14.52□□□□□ -0.09
TMEM54Q969K7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM54Q969K7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TMEM54Q969K7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 PCDH8P1-201ENST00000428983 2773 ntBASIC14.51□□□□□ -0.09
TMEM54Q969K7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms