Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 AL162274.1-201ENST00000617191 1098 ntBASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 AC141586.5-201ENST00000624546 2050 ntBASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 AC017083.2-201ENST00000608069 979 ntBASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAPGEF4Q8WZA2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 AC023310.3-201ENST00000557027 670 ntBASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 AC100756.1-201ENST00000562736 682 ntBASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 AC138749.3-201ENST00000567691 622 ntBASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 AC116165.1-201ENST00000611806 668 ntBASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF4Q8WZA2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 MYCLP2-201ENST00000449268 967 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms