Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNED1Q8TER0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 ACTBP11-201ENST00000436287 1126 ntBASIC19.84■□□□□ 0.77
SNED1Q8TER0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 AC233724.13-201ENST00000598383 410 ntBASIC19.84■□□□□ 0.77
SNED1Q8TER0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.84■□□□□ 0.77
SNED1Q8TER0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNED1Q8TER0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNED1Q8TER0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNED1Q8TER0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNED1Q8TER0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNED1Q8TER0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNED1Q8TER0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNED1Q8TER0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNED1Q8TER0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.83■□□□□ 0.77
SNED1Q8TER0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SNED1Q8TER0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.83■□□□□ 0.77
SNED1Q8TER0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SNED1Q8TER0 AC060834.1-201ENST00000443027 2032 ntBASIC19.83■□□□□ 0.77
SNED1Q8TER0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNED1Q8TER0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNED1Q8TER0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNED1Q8TER0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNED1Q8TER0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.83■□□□□ 0.76
SNED1Q8TER0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNED1Q8TER0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNED1Q8TER0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.83■□□□□ 0.76
SNED1Q8TER0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNED1Q8TER0 AC099336.1-201ENST00000417053 1171 ntBASIC19.83■□□□□ 0.76
SNED1Q8TER0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SNED1Q8TER0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.76
SNED1Q8TER0 BTNL10-201ENST00000595971 695 ntBASIC19.83■□□□□ 0.76
SNED1Q8TER0 MIR6787-201ENST00000616675 61 ntBASIC19.83■□□□□ 0.76
SNED1Q8TER0 MIR6869-201ENST00000619434 62 ntBASIC19.83■□□□□ 0.76
SNED1Q8TER0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SNED1Q8TER0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.83■□□□□ 0.76
SNED1Q8TER0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.83■□□□□ 0.76
SNED1Q8TER0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SNED1Q8TER0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.83■□□□□ 0.76
SNED1Q8TER0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNED1Q8TER0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNED1Q8TER0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNED1Q8TER0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNED1Q8TER0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNED1Q8TER0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNED1Q8TER0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNED1Q8TER0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNED1Q8TER0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 LINC01115-203ENST00000606068 577 ntBASIC19.82■□□□□ 0.76
SNED1Q8TER0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNED1Q8TER0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.82■□□□□ 0.76
SNED1Q8TER0 AL645728.1-201ENST00000366221 2101 ntBASIC19.81■□□□□ 0.76
SNED1Q8TER0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.81■□□□□ 0.76
SNED1Q8TER0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNED1Q8TER0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms