Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FOXO1B-201ENST00000504678 1527 ntBASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 TERF1P3-201ENST00000505638 1227 ntBASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 FLJ38576-201ENST00000623820 2459 ntBASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 AL162727.3-201ENST00000635661 2787 ntBASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SHKBP1Q8TBC3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 AL512638.1-201ENST00000457493 794 ntBASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 AC190387.1-201ENST00000551683 408 ntBASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 AC018529.1-201ENST00000613063 361 ntBASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.33■□□□□ 0.36
SHKBP1Q8TBC3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 PRYP6-201ENST00000514804 343 ntBASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 LINC02560-201ENST00000596379 459 ntBASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 AC239800.4-201ENST00000603712 296 ntBASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 AL671710.1-201ENST00000610245 2349 ntBASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SHKBP1Q8TBC3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms