Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 CEND1P1-201ENST00000451006 455 ntBASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 AC109635.5-201ENST00000533593 962 ntBASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 MIR4469-201ENST00000583919 79 ntBASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 AC021097.1-201ENST00000607902 574 ntBASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 AL671277.1-201ENST00000429656 993 ntBASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC82Q8N4S0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 AC124067.4-201ENST00000519691 2379 ntBASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 GGT3P-204ENST00000453783 1664 ntBASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC82Q8N4S0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 AL118508.1-201ENST00000613502 2345 ntBASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC82Q8N4S0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms