Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL645608.8-201ENST00000606034 2086 ntBASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 AL391256.1-201ENST00000443260 1855 ntBASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 AC008677.1-201ENST00000519230 1561 ntBASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 KLF2P3-201ENST00000451977 1087 ntBASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 SPCS2P1-201ENST00000561636 679 ntBASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 AC005498.2-205ENST00000593218 784 ntBASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.29■□□□□ 0.04
H3F3CQ6NXT2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 AL118508.1-201ENST00000613502 2345 ntBASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 DUX4L27-201ENST00000554796 1261 ntBASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 AC011467.4-201ENST00000594891 528 ntBASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 AL096865.1-201ENST00000606796 927 ntBASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 AL645728.1-201ENST00000366221 2101 ntBASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3F3CQ6NXT2 FOXO1B-201ENST00000504678 1527 ntBASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H3F3CQ6NXT2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms