Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 AL009183.1-201ENST00000603760 355 ntBASIC17.15■□□□□ 0.34
LRRC38Q5VT99 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 AC092919.2-201ENST00000623631 1645 ntBASIC17.14■□□□□ 0.33
LRRC38Q5VT99 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 CDC14C-201ENST00000428251 1719 ntBASIC17.14■□□□□ 0.33
LRRC38Q5VT99 AC069224.1-201ENST00000566372 1715 ntBASIC17.14■□□□□ 0.33
LRRC38Q5VT99 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 AC092474.2-201ENST00000424288 719 ntBASIC17.14■□□□□ 0.33
LRRC38Q5VT99 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 Z83851.2-201ENST00000609564 659 ntBASIC17.14■□□□□ 0.33
LRRC38Q5VT99 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 AC007064.4-201ENST00000637740 555 ntBASIC17.14■□□□□ 0.33
LRRC38Q5VT99 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 HLA-A-201ENST00000376802 1334 ntBASIC17.14■□□□□ 0.33
LRRC38Q5VT99 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 AC112504.1-201ENST00000623415 1841 ntBASIC17.14■□□□□ 0.33
LRRC38Q5VT99 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC38Q5VT99 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 AC093724.1-201ENST00000448659 1027 ntBASIC17.13■□□□□ 0.33
LRRC38Q5VT99 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 LINC02447-202ENST00000501888 2146 ntBASIC17.13■□□□□ 0.33
LRRC38Q5VT99 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 AC023141.13-201ENST00000604991 943 ntBASIC17.13■□□□□ 0.33
LRRC38Q5VT99 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC38Q5VT99 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.12■□□□□ 0.33
LRRC38Q5VT99 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms