Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VARS2Q5ST30 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VARS2Q5ST30 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.46■□□□□ 0.38
VARS2Q5ST30 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.45■□□□□ 0.38
VARS2Q5ST30 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.45■□□□□ 0.38
VARS2Q5ST30 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.45■□□□□ 0.38
VARS2Q5ST30 FAM207CP-201ENST00000443486 507 ntBASIC17.45■□□□□ 0.38
VARS2Q5ST30 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.45■□□□□ 0.38
VARS2Q5ST30 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.45■□□□□ 0.38
VARS2Q5ST30 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.45■□□□□ 0.38
VARS2Q5ST30 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 AC105021.1-202ENST00000570572 669 ntBASIC17.45■□□□□ 0.38
VARS2Q5ST30 LINC02560-201ENST00000596379 459 ntBASIC17.45■□□□□ 0.38
VARS2Q5ST30 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.45■□□□□ 0.38
VARS2Q5ST30 RN7SL828P-201ENST00000607615 303 ntBASIC17.45■□□□□ 0.38
VARS2Q5ST30 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.45■□□□□ 0.38
VARS2Q5ST30 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VARS2Q5ST30 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VARS2Q5ST30 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VARS2Q5ST30 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
VARS2Q5ST30 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VARS2Q5ST30 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 AL589702.1-201ENST00000641229 1509 ntBASIC17.44■□□□□ 0.38
VARS2Q5ST30 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.44■□□□□ 0.38
VARS2Q5ST30 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.44■□□□□ 0.38
VARS2Q5ST30 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.44■□□□□ 0.38
VARS2Q5ST30 MRPS18AP1-201ENST00000414458 589 ntBASIC17.44■□□□□ 0.38
VARS2Q5ST30 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.44■□□□□ 0.38
VARS2Q5ST30 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.44■□□□□ 0.38
VARS2Q5ST30 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.44■□□□□ 0.38
VARS2Q5ST30 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 AC008761.3-201ENST00000624803 892 ntBASIC17.44■□□□□ 0.38
VARS2Q5ST30 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VARS2Q5ST30 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.44■□□□□ 0.38
VARS2Q5ST30 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARS2Q5ST30 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 AL589739.1-201ENST00000607720 493 ntBASIC17.43■□□□□ 0.38
VARS2Q5ST30 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms