Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL590640.2-201ENST00000457038 527 ntBASIC21.8■■□□□ 1.08
COL16A1Q07092 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.8■■□□□ 1.08
COL16A1Q07092 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC21.8■■□□□ 1.08
COL16A1Q07092 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
COL16A1Q07092 FGFR3P5-201ENST00000564496 886 ntBASIC21.8■■□□□ 1.08
COL16A1Q07092 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC21.8■■□□□ 1.08
COL16A1Q07092 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.8■■□□□ 1.08
COL16A1Q07092 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.79■■□□□ 1.08
COL16A1Q07092 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.79■■□□□ 1.08
COL16A1Q07092 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL16A1Q07092 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL16A1Q07092 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL16A1Q07092 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC21.79■■□□□ 1.08
COL16A1Q07092 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL16A1Q07092 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC21.79■■□□□ 1.08
COL16A1Q07092 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.79■■□□□ 1.08
COL16A1Q07092 TARDBPP1-201ENST00000442013 1203 ntBASIC21.79■■□□□ 1.08
COL16A1Q07092 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
COL16A1Q07092 AC114501.1-201ENST00000445949 172 ntBASIC21.79■■□□□ 1.08
COL16A1Q07092 CFL1-214ENST00000534769 758 ntTSL 2 BASIC21.79■■□□□ 1.08
COL16A1Q07092 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC21.79■■□□□ 1.08
COL16A1Q07092 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL16A1Q07092 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.79■■□□□ 1.08
COL16A1Q07092 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.79■■□□□ 1.08
COL16A1Q07092 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL16A1Q07092 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL16A1Q07092 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.79■■□□□ 1.08
COL16A1Q07092 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.79■■□□□ 1.08
COL16A1Q07092 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC21.78■■□□□ 1.08
COL16A1Q07092 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.78■■□□□ 1.08
COL16A1Q07092 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
COL16A1Q07092 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.78■■□□□ 1.08
COL16A1Q07092 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
COL16A1Q07092 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC21.78■■□□□ 1.08
COL16A1Q07092 KRT18P64-201ENST00000434946 1219 ntBASIC21.78■■□□□ 1.08
COL16A1Q07092 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.78■■□□□ 1.08
COL16A1Q07092 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC21.78■■□□□ 1.08
COL16A1Q07092 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 AC104982.3-201ENST00000581995 514 ntBASIC21.78■■□□□ 1.08
COL16A1Q07092 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.78■■□□□ 1.08
COL16A1Q07092 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.78■■□□□ 1.08
COL16A1Q07092 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
COL16A1Q07092 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL16A1Q07092 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
COL16A1Q07092 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC21.77■■□□□ 1.08
COL16A1Q07092 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 AC016700.1-201ENST00000429424 312 ntBASIC21.77■■□□□ 1.08
COL16A1Q07092 HOMER2P2-201ENST00000451621 847 ntBASIC21.77■■□□□ 1.08
COL16A1Q07092 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC21.77■■□□□ 1.08
COL16A1Q07092 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC21.77■■□□□ 1.08
COL16A1Q07092 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC21.77■■□□□ 1.08
COL16A1Q07092 RN7SL555P-201ENST00000584742 339 ntBASIC21.77■■□□□ 1.08
COL16A1Q07092 MIR4321-201ENST00000592276 80 ntBASIC21.77■■□□□ 1.08
COL16A1Q07092 AC079336.7-201ENST00000623428 1078 ntBASIC21.77■■□□□ 1.08
COL16A1Q07092 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.77■■□□□ 1.08
COL16A1Q07092 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.77■■□□□ 1.08
COL16A1Q07092 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.77■■□□□ 1.08
COL16A1Q07092 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL16A1Q07092 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.77■■□□□ 1.08
COL16A1Q07092 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
COL16A1Q07092 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.77■■□□□ 1.07
COL16A1Q07092 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL16A1Q07092 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
COL16A1Q07092 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
COL16A1Q07092 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
COL16A1Q07092 RN7SL574P-201ENST00000581512 297 ntBASIC21.77■■□□□ 1.07
COL16A1Q07092 CYGB-203ENST00000589145 788 ntTSL 3 BASIC21.77■■□□□ 1.07
COL16A1Q07092 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.76■■□□□ 1.07
COL16A1Q07092 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.76■■□□□ 1.07
COL16A1Q07092 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.76■■□□□ 1.07
COL16A1Q07092 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms