Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
RAB38P57729 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB38P57729 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB38P57729 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RAB38P57729 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB38P57729 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
RAB38P57729 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB38P57729 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB38P57729 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB38P57729 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB38P57729 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB38P57729 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RAB38P57729 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB38P57729 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB38P57729 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB38P57729 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAB38P57729 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB38P57729 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.52■□□□□ 0.08
RAB38P57729 AC254562.1-201ENST00000417586 456 ntBASIC15.52■□□□□ 0.08
RAB38P57729 AL592309.1-201ENST00000443127 649 ntBASIC15.52■□□□□ 0.08
RAB38P57729 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB38P57729 AC105233.2-201ENST00000523697 349 ntBASIC15.52■□□□□ 0.08
RAB38P57729 AF228730.5-201ENST00000530288 346 ntBASIC15.52■□□□□ 0.08
RAB38P57729 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB38P57729 KRT8P23-201ENST00000560090 1207 ntBASIC15.52■□□□□ 0.08
RAB38P57729 AL138918.1-201ENST00000568306 659 ntBASIC15.52■□□□□ 0.08
RAB38P57729 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB38P57729 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB38P57729 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB38P57729 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RAB38P57729 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB38P57729 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB38P57729 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
RAB38P57729 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB38P57729 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB38P57729 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB38P57729 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB38P57729 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB38P57729 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB38P57729 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RAB38P57729 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 AC004461.1-201ENST00000412461 403 ntBASIC15.51■□□□□ 0.07
RAB38P57729 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB38P57729 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB38P57729 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB38P57729 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB38P57729 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB38P57729 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB38P57729 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RAB38P57729 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 AC005622.1-201ENST00000636801 1703 ntBASIC15.51■□□□□ 0.07
RAB38P57729 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB38P57729 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB38P57729 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAB38P57729 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB38P57729 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAB38P57729 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB38P57729 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.5■□□□□ 0.07
RAB38P57729 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB38P57729 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB38P57729 LINC01225-203ENST00000563550 1244 ntBASIC15.5■□□□□ 0.07
RAB38P57729 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
RAB38P57729 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 AC004835.2-201ENST00000603762 682 ntBASIC15.5■□□□□ 0.07
RAB38P57729 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB38P57729 AL691403.2-201ENST00000618460 490 ntBASIC15.5■□□□□ 0.07
RAB38P57729 AC079781.4-201ENST00000641908 219 ntBASIC15.5■□□□□ 0.07
RAB38P57729 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms