Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.42■□□□□ 0.22
ZNF140P52738 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
ZNF140P52738 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF140P52738 AL135744.1-201ENST00000565098 629 ntBASIC16.42■□□□□ 0.22
ZNF140P52738 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.42■□□□□ 0.22
ZNF140P52738 MTDHP5-201ENST00000598980 586 ntBASIC16.42■□□□□ 0.22
ZNF140P52738 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ZNF140P52738 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
ZNF140P52738 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF140P52738 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF140P52738 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF140P52738 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF140P52738 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF140P52738 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.42■□□□□ 0.22
ZNF140P52738 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF140P52738 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF140P52738 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF140P52738 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF140P52738 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF140P52738 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ZNF140P52738 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF140P52738 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF140P52738 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF140P52738 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF140P52738 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF140P52738 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF140P52738 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ZNF140P52738 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF140P52738 AL671277.1-201ENST00000429656 993 ntBASIC16.41■□□□□ 0.22
ZNF140P52738 PRYP6-201ENST00000514804 343 ntBASIC16.41■□□□□ 0.22
ZNF140P52738 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF140P52738 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF140P52738 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF140P52738 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 AL513523.2-202ENST00000427283 2040 ntBASIC16.41■□□□□ 0.22
ZNF140P52738 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF140P52738 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF140P52738 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ZNF140P52738 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF140P52738 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ZNF140P52738 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF140P52738 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 U82695.1-201ENST00000635752 1889 ntBASIC16.4■□□□□ 0.22
ZNF140P52738 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF140P52738 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 TFAMP1-201ENST00000412727 736 ntBASIC16.4■□□□□ 0.22
ZNF140P52738 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF140P52738 HTR5BP-201ENST00000430851 1154 ntBASIC16.4■□□□□ 0.22
ZNF140P52738 MKNK2P1-201ENST00000437526 628 ntBASIC16.4■□□□□ 0.22
ZNF140P52738 AL138918.1-201ENST00000568306 659 ntBASIC16.4■□□□□ 0.22
ZNF140P52738 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
ZNF140P52738 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF140P52738 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF140P52738 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF140P52738 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
ZNF140P52738 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF140P52738 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF140P52738 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
ZNF140P52738 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
ZNF140P52738 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF140P52738 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF140P52738 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF140P52738 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF140P52738 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ZNF140P52738 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms