Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TM4SF1P30408 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
TM4SF1P30408 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TM4SF1P30408 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.26■□□□□ 0.83
TM4SF1P30408 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.26■□□□□ 0.83
TM4SF1P30408 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.26■□□□□ 0.83
TM4SF1P30408 AL442647.2-201ENST00000429864 857 ntBASIC20.26■□□□□ 0.83
TM4SF1P30408 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.26■□□□□ 0.83
TM4SF1P30408 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.26■□□□□ 0.83
TM4SF1P30408 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.26■□□□□ 0.83
TM4SF1P30408 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.26■□□□□ 0.83
TM4SF1P30408 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TM4SF1P30408 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.26■□□□□ 0.83
TM4SF1P30408 MIR5189-201ENST00000577370 114 ntBASIC20.26■□□□□ 0.83
TM4SF1P30408 RN7SL219P-201ENST00000582872 296 ntBASIC20.26■□□□□ 0.83
TM4SF1P30408 LINC01115-203ENST00000606068 577 ntBASIC20.26■□□□□ 0.83
TM4SF1P30408 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.26■□□□□ 0.83
TM4SF1P30408 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TM4SF1P30408 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.26■□□□□ 0.83
TM4SF1P30408 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.26■□□□□ 0.83
TM4SF1P30408 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TM4SF1P30408 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF1P30408 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.25■□□□□ 0.83
TM4SF1P30408 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 AC141586.5-201ENST00000624546 2050 ntBASIC20.25■□□□□ 0.83
TM4SF1P30408 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.25■□□□□ 0.83
TM4SF1P30408 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.25■□□□□ 0.83
TM4SF1P30408 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TM4SF1P30408 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TM4SF1P30408 AC092933.1-201ENST00000393644 945 ntBASIC20.25■□□□□ 0.83
TM4SF1P30408 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.25■□□□□ 0.83
TM4SF1P30408 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.25■□□□□ 0.83
TM4SF1P30408 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TM4SF1P30408 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.25■□□□□ 0.83
TM4SF1P30408 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.25■□□□□ 0.83
TM4SF1P30408 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.25■□□□□ 0.83
TM4SF1P30408 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TM4SF1P30408 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TM4SF1P30408 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.25■□□□□ 0.83
TM4SF1P30408 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF1P30408 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TM4SF1P30408 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.24■□□□□ 0.83
TM4SF1P30408 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TM4SF1P30408 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM4SF1P30408 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TM4SF1P30408 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TM4SF1P30408 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TM4SF1P30408 AC020907.1-201ENST00000616460 1350 ntBASIC20.24■□□□□ 0.83
TM4SF1P30408 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TM4SF1P30408 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.24■□□□□ 0.83
TM4SF1P30408 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.24■□□□□ 0.83
TM4SF1P30408 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM4SF1P30408 AL355994.2-201ENST00000447882 704 ntBASIC20.24■□□□□ 0.83
TM4SF1P30408 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TM4SF1P30408 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TM4SF1P30408 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.24■□□□□ 0.83
TM4SF1P30408 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM4SF1P30408 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.24■□□□□ 0.83
TM4SF1P30408 MIR4321-201ENST00000592276 80 ntBASIC20.24■□□□□ 0.83
TM4SF1P30408 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.24■□□□□ 0.83
TM4SF1P30408 AL158212.4-201ENST00000624062 1286 ntBASIC20.24■□□□□ 0.83
TM4SF1P30408 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TM4SF1P30408 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TM4SF1P30408 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.24■□□□□ 0.83
TM4SF1P30408 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM4SF1P30408 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM4SF1P30408 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.24■□□□□ 0.83
TM4SF1P30408 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TM4SF1P30408 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.24■□□□□ 0.83
TM4SF1P30408 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.24■□□□□ 0.83
TM4SF1P30408 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 AL133373.2-201ENST00000623187 2828 ntBASIC20.23■□□□□ 0.83
TM4SF1P30408 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TM4SF1P30408 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TM4SF1P30408 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TM4SF1P30408 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.23■□□□□ 0.83
TM4SF1P30408 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.23■□□□□ 0.83
TM4SF1P30408 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms