Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.21■□□□□ 0.67
CTNND1O60716 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.21■□□□□ 0.67
CTNND1O60716 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 PP12613-201ENST00000424958 2230 ntBASIC19.21■□□□□ 0.67
CTNND1O60716 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.21■□□□□ 0.66
CTNND1O60716 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CTNND1O60716 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CTNND1O60716 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CTNND1O60716 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.2■□□□□ 0.66
CTNND1O60716 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CTNND1O60716 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.2■□□□□ 0.66
CTNND1O60716 SERBP1P3-201ENST00000459980 809 ntBASIC19.2■□□□□ 0.66
CTNND1O60716 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.2■□□□□ 0.66
CTNND1O60716 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.2■□□□□ 0.66
CTNND1O60716 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.2■□□□□ 0.66
CTNND1O60716 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.2■□□□□ 0.66
CTNND1O60716 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.2■□□□□ 0.66
CTNND1O60716 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CTNND1O60716 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.2■□□□□ 0.66
CTNND1O60716 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CTNND1O60716 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CTNND1O60716 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CTNND1O60716 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNND1O60716 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
CTNND1O60716 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.19■□□□□ 0.66
CTNND1O60716 GPAA1P2-202ENST00000606848 1787 ntBASIC19.19■□□□□ 0.66
CTNND1O60716 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.19■□□□□ 0.66
CTNND1O60716 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CTNND1O60716 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNND1O60716 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CTNND1O60716 AC114501.2-201ENST00000439631 535 ntBASIC19.19■□□□□ 0.66
CTNND1O60716 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.19■□□□□ 0.66
CTNND1O60716 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNND1O60716 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 DOC2GP-202ENST00000514950 1163 ntBASIC19.19■□□□□ 0.66
CTNND1O60716 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.19■□□□□ 0.66
CTNND1O60716 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNND1O60716 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNND1O60716 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 AC044860.1-202ENST00000559481 777 ntBASIC19.19■□□□□ 0.66
CTNND1O60716 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNND1O60716 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNND1O60716 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNND1O60716 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.19■□□□□ 0.66
CTNND1O60716 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.19■□□□□ 0.66
CTNND1O60716 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNND1O60716 PRORSD1P-202ENST00000563365 2154 ntBASIC19.19■□□□□ 0.66
CTNND1O60716 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNND1O60716 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.18■□□□□ 0.66
CTNND1O60716 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CTNND1O60716 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CTNND1O60716 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CTNND1O60716 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 SPDYE19P-201ENST00000338590 713 ntBASIC19.18■□□□□ 0.66
CTNND1O60716 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CTNND1O60716 DGCR5-201ENST00000399539 862 ntBASIC19.18■□□□□ 0.66
CTNND1O60716 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 AC093004.1-201ENST00000508850 424 ntBASIC19.18■□□□□ 0.66
CTNND1O60716 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.18■□□□□ 0.66
CTNND1O60716 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 AL033527.5-202ENST00000641632 1098 ntBASIC19.18■□□□□ 0.66
CTNND1O60716 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTNND1O60716 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
CTNND1O60716 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms