Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 AC006277.1-201ENST00000624348 1610 ntBASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 CROCCP2-202ENST00000412962 2773 ntBASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 UGT1A2P-201ENST00000454886 866 ntBASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 LINC02560-201ENST00000596379 459 ntBASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1G3Q9Y6M4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 AL035456.1-201ENST00000456064 1369 ntBASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 AC027369.6-201ENST00000525520 931 ntBASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 AC003101.2-201ENST00000612557 442 ntBASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 AF228730.6-201ENST00000641497 218 ntBASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 AC084121.3-201ENST00000641716 218 ntBASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 AC105233.6-201ENST00000642093 218 ntBASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1G3Q9Y6M4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 FAM220BP-201ENST00000377689 816 ntBASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 MIR661-201ENST00000384842 89 ntBASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms