Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RAB43P1-201ENST00000561790 589 ntBASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 AC008494.3-201ENST00000606615 944 ntBASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 AC108860.2-201ENST00000562760 2183 ntBASIC15.85■□□□□ 0.13
PCDHGA1Q9Y5H4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 AC012317.2-201ENST00000623305 2251 ntBASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 AC132938.2-201ENST00000579188 680 ntBASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 CHCHD2P3-201ENST00000603038 451 ntBASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 AL591163.1-201ENST00000641757 987 ntBASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 SLC7A15P-201ENST00000424028 1363 ntBASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA1Q9Y5H4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDHGA1Q9Y5H4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA1Q9Y5H4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PCDHGA1Q9Y5H4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA1Q9Y5H4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA1Q9Y5H4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA1Q9Y5H4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA1Q9Y5H4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA1Q9Y5H4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 TUBB8P12-201ENST00000308911 1335 ntBASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 TUBB7P-202ENST00000428444 1305 ntBASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms