Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 AC061975.2-201ENST00000581722 295 ntBASIC18.53■□□□□ 0.56
TRIM17Q9Y577 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 AL118558.3-201ENST00000607414 1079 ntBASIC18.53■□□□□ 0.56
TRIM17Q9Y577 AL365330.1-201ENST00000607459 531 ntBASIC18.53■□□□□ 0.56
TRIM17Q9Y577 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 MIR663B-201ENST00000408361 115 ntBASIC18.52■□□□□ 0.56
TRIM17Q9Y577 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 AC006033.1-201ENST00000440505 426 ntBASIC18.52■□□□□ 0.56
TRIM17Q9Y577 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 AC020763.4-201ENST00000623414 4170 ntBASIC18.52■□□□□ 0.56
TRIM17Q9Y577 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM17Q9Y577 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TRIM17Q9Y577 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM17Q9Y577 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM17Q9Y577 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM17Q9Y577 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.52■□□□□ 0.55
TRIM17Q9Y577 AC093525.9-201ENST00000624961 1746 ntBASIC18.52■□□□□ 0.55
TRIM17Q9Y577 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AL671710.1-201ENST00000610245 2349 ntBASIC18.51■□□□□ 0.55
TRIM17Q9Y577 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC138932.1-201ENST00000534164 6830 ntBASIC18.51■□□□□ 0.55
TRIM17Q9Y577 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC108860.2-201ENST00000562760 2183 ntBASIC18.51■□□□□ 0.55
TRIM17Q9Y577 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AP000812.2-201ENST00000538934 718 ntBASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC079328.1-201ENST00000560358 952 ntBASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 RN7SL560P-201ENST00000577943 264 ntBASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC025048.3-201ENST00000590609 569 ntBASIC18.51■□□□□ 0.55
TRIM17Q9Y577 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC005702.4-201ENST00000618393 416 ntBASIC18.51■□□□□ 0.55
TRIM17Q9Y577 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM17Q9Y577 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM17Q9Y577 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM17Q9Y577 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM17Q9Y577 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM17Q9Y577 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM17Q9Y577 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM17Q9Y577 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms