Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 MEIS3P1-201ENST00000495167 958 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 TP53TG3HP-202ENST00000569755 579 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 AL132655.2-201ENST00000596276 594 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 AC007541.1-201ENST00000570282 1469 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 AC138932.1-201ENST00000534164 6830 ntBASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
DNMT3BQ9UBC3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 AL512652.2-201ENST00000625156 1716 ntBASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 HLA-J-202ENST00000469281 1241 ntBASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 API5-211ENST00000534695 560 ntTSL 5 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.16■□□□□ 0.34
DNMT3BQ9UBC3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 GNAQP1-201ENST00000444815 1067 ntBASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 AC093724.1-201ENST00000448659 1027 ntBASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 AC135586.1-201ENST00000539323 574 ntBASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 AL139011.1-202ENST00000642063 584 ntBASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DNMT3BQ9UBC3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms