Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 SLC25A24P2-201ENST00000415059 510 ntBASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 AC131009.4-201ENST00000624048 1740 ntBASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CSMD1Q96PZ7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 DUX4L45-201ENST00000566406 1057 ntBASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 AL391069.4-201ENST00000609583 481 ntBASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 RN7SL828P-201ENST00000607615 303 ntBASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 UBALD1-205ENST00000590891 2641 ntBASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 PRYP6-201ENST00000514804 343 ntBASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSMD1Q96PZ7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 AP001889.1-201ENST00000525414 633 ntBASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 LINC00304-203ENST00000565008 1864 ntBASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CSMD1Q96PZ7 BX323043.1-201ENST00000641006 1765 ntBASIC13.9□□□□□ -0.19
CSMD1Q96PZ7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms