Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 FDX1P1-201ENST00000449115 551 ntBASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 AL121894.2-201ENST00000602977 491 ntBASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 AC021097.1-201ENST00000607902 574 ntBASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDF1Q96CC6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 PMS2P4-201ENST00000412466 1052 ntBASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDF1Q96CC6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 AL596087.1-201ENST00000400979 1969 ntBASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 IL9RP2-201ENST00000423948 1312 ntBASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RHBDF1Q96CC6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RHBDF1Q96CC6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.11■□□□□ 0.17
RHBDF1Q96CC6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.11■□□□□ 0.17
RHBDF1Q96CC6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RHBDF1Q96CC6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 2337.3 ms