Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SETD9Q8NE22 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SETD9Q8NE22 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.27■□□□□ 0.03
SETD9Q8NE22 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.27■□□□□ 0.03
SETD9Q8NE22 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.27■□□□□ 0.03
SETD9Q8NE22 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.27■□□□□ 0.03
SETD9Q8NE22 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SETD9Q8NE22 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SETD9Q8NE22 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.27■□□□□ 0.03
SETD9Q8NE22 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SETD9Q8NE22 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.27■□□□□ 0.03
SETD9Q8NE22 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SETD9Q8NE22 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.26■□□□□ 0.03
SETD9Q8NE22 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 Z83836.1-201ENST00000624605 1642 ntBASIC15.26■□□□□ 0.03
SETD9Q8NE22 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 AC092597.1-201ENST00000487352 616 ntBASIC15.26■□□□□ 0.03
SETD9Q8NE22 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.26■□□□□ 0.03
SETD9Q8NE22 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 AC097376.2-205ENST00000610159 5334 ntBASIC15.26■□□□□ 0.03
SETD9Q8NE22 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SETD9Q8NE22 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.26■□□□□ 0.03
SETD9Q8NE22 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 REXO1L8P-201ENST00000604378 1897 ntBASIC15.25■□□□□ 0.03
SETD9Q8NE22 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 MIR648-201ENST00000385046 94 ntBASIC15.25■□□□□ 0.03
SETD9Q8NE22 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 AC073592.5-201ENST00000624854 528 ntBASIC15.25■□□□□ 0.03
SETD9Q8NE22 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 AC069224.1-201ENST00000566372 1715 ntBASIC15.25■□□□□ 0.03
SETD9Q8NE22 AC007326.2-201ENST00000624224 7579 ntBASIC15.25■□□□□ 0.03
SETD9Q8NE22 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SETD9Q8NE22 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SETD9Q8NE22 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SETD9Q8NE22 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms