Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.56■□□□□ 0.4
RNF135Q8IUD6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.55■□□□□ 0.4
RNF135Q8IUD6 MIR1909-201ENST00000411312 80 ntBASIC17.55■□□□□ 0.4
RNF135Q8IUD6 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.55■□□□□ 0.4
RNF135Q8IUD6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 AC012183.1-201ENST00000625197 499 ntBASIC17.55■□□□□ 0.4
RNF135Q8IUD6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF135Q8IUD6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 AC009053.2-201ENST00000563701 2365 ntBASIC17.54■□□□□ 0.4
RNF135Q8IUD6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 AP000842.3-202ENST00000569238 1080 ntBASIC17.54■□□□□ 0.4
RNF135Q8IUD6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 AL132655.2-201ENST00000596276 594 ntBASIC17.54■□□□□ 0.4
RNF135Q8IUD6 AC008267.7-201ENST00000624570 1194 ntBASIC17.54■□□□□ 0.4
RNF135Q8IUD6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF135Q8IUD6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.53■□□□□ 0.4
RNF135Q8IUD6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 AP001094.4-201ENST00000579008 2176 ntBASIC17.53■□□□□ 0.4
RNF135Q8IUD6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms