Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 COX5BP2-201ENST00000392354 334 ntBASIC12.56□□□□□ -0.4
MRPL54Q6P161 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AC019129.2-201ENST00000609837 1235 ntBASIC12.56□□□□□ -0.4
MRPL54Q6P161 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AC004263.2-201ENST00000617183 678 ntBASIC12.56□□□□□ -0.4
MRPL54Q6P161 AL109923.1-201ENST00000618799 583 ntBASIC12.56□□□□□ -0.4
MRPL54Q6P161 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.56□□□□□ -0.4
MRPL54Q6P161 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 AC010460.3-201ENST00000511359 1579 ntBASIC12.56□□□□□ -0.4
MRPL54Q6P161 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms