Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SCN1BQ07699 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
SCN1BQ07699 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SCN1BQ07699 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SCN1BQ07699 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SCN1BQ07699 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SCN1BQ07699 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SCN1BQ07699 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.84□□□□□ -0.03
SCN1BQ07699 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCN1BQ07699 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SCN1BQ07699 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SCN1BQ07699 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.83□□□□□ -0.04
SCN1BQ07699 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.83□□□□□ -0.04
SCN1BQ07699 AC010491.1-201ENST00000563101 2797 ntBASIC14.83□□□□□ -0.04
SCN1BQ07699 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SCN1BQ07699 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.83□□□□□ -0.04
SCN1BQ07699 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SCN1BQ07699 AC010460.3-201ENST00000511359 1579 ntBASIC14.83□□□□□ -0.04
SCN1BQ07699 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 OR2I1P-209ENST00000641730 5365 ntBASIC14.83□□□□□ -0.04
SCN1BQ07699 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.83□□□□□ -0.04
SCN1BQ07699 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
SCN1BQ07699 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.83□□□□□ -0.04
SCN1BQ07699 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 AC011840.4-201ENST00000578471 627 ntBASIC14.83□□□□□ -0.04
SCN1BQ07699 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
SCN1BQ07699 AC011498.5-201ENST00000592027 486 ntBASIC14.83□□□□□ -0.04
SCN1BQ07699 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.83□□□□□ -0.04
SCN1BQ07699 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.83□□□□□ -0.04
SCN1BQ07699 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SCN1BQ07699 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.83□□□□□ -0.04
SCN1BQ07699 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.83□□□□□ -0.04
SCN1BQ07699 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SCN1BQ07699 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.82□□□□□ -0.04
SCN1BQ07699 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
SCN1BQ07699 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
SCN1BQ07699 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SCN1BQ07699 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SCN1BQ07699 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SCN1BQ07699 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SCN1BQ07699 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.82□□□□□ -0.04
SCN1BQ07699 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.82□□□□□ -0.04
SCN1BQ07699 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.82□□□□□ -0.04
SCN1BQ07699 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 AL049597.2-201ENST00000565575 961 ntBASIC14.82□□□□□ -0.04
SCN1BQ07699 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SCN1BQ07699 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.82□□□□□ -0.04
SCN1BQ07699 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.82□□□□□ -0.04
SCN1BQ07699 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SCN1BQ07699 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms