Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.94■□□□□ 0.46
SNRPFP62306 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRPFP62306 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRPFP62306 BX842568.4-201ENST00000421222 227 ntBASIC17.94■□□□□ 0.46
SNRPFP62306 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.94■□□□□ 0.46
SNRPFP62306 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.94■□□□□ 0.46
SNRPFP62306 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.94■□□□□ 0.46
SNRPFP62306 AC098859.1-201ENST00000502915 1238 ntBASIC17.94■□□□□ 0.46
SNRPFP62306 AC243562.1-201ENST00000560672 389 ntBASIC17.94■□□□□ 0.46
SNRPFP62306 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
SNRPFP62306 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.94■□□□□ 0.46
SNRPFP62306 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 AC084121.4-201ENST00000641598 221 ntBASIC17.94■□□□□ 0.46
SNRPFP62306 AF228730.8-201ENST00000642140 221 ntBASIC17.94■□□□□ 0.46
SNRPFP62306 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRPFP62306 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRPFP62306 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRPFP62306 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.94■□□□□ 0.46
SNRPFP62306 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SNRPFP62306 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SNRPFP62306 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SNRPFP62306 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.94■□□□□ 0.46
SNRPFP62306 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNRPFP62306 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SNRPFP62306 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.93■□□□□ 0.46
SNRPFP62306 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 AL589702.1-201ENST00000641229 1509 ntBASIC17.93■□□□□ 0.46
SNRPFP62306 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.93■□□□□ 0.46
SNRPFP62306 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SNRPFP62306 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 MIR346-201ENST00000362234 95 ntBASIC17.93■□□□□ 0.46
SNRPFP62306 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 GPX1P2-201ENST00000429271 606 ntBASIC17.93■□□□□ 0.46
SNRPFP62306 AC245100.5-201ENST00000452108 331 ntBASIC17.93■□□□□ 0.46
SNRPFP62306 LINC01225-203ENST00000563550 1244 ntBASIC17.93■□□□□ 0.46
SNRPFP62306 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.93■□□□□ 0.46
SNRPFP62306 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.93■□□□□ 0.46
SNRPFP62306 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.93■□□□□ 0.46
SNRPFP62306 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.93■□□□□ 0.46
SNRPFP62306 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.93■□□□□ 0.46
SNRPFP62306 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNRPFP62306 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.93■□□□□ 0.46
SNRPFP62306 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.93■□□□□ 0.46
SNRPFP62306 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SNRPFP62306 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNRPFP62306 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.92■□□□□ 0.46
SNRPFP62306 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
SNRPFP62306 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SNRPFP62306 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.92■□□□□ 0.46
SNRPFP62306 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
SNRPFP62306 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SNRPFP62306 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 RPSAP43-201ENST00000402237 625 ntBASIC17.92■□□□□ 0.46
SNRPFP62306 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.92■□□□□ 0.46
SNRPFP62306 UPF3AP3-201ENST00000420996 769 ntBASIC17.92■□□□□ 0.46
SNRPFP62306 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms