Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC079140.1-201ENST00000508039 487 ntBASIC18.96■□□□□ 0.63
CHMP4BP1P59074 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 DUX4L17-201ENST00000557360 1267 ntBASIC18.96■□□□□ 0.63
CHMP4BP1P59074 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 AL645728.2-201ENST00000641974 660 ntBASIC18.96■□□□□ 0.63
CHMP4BP1P59074 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP4BP1P59074 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
CHMP4BP1P59074 AL391005.1-201ENST00000623953 2435 ntBASIC18.95■□□□□ 0.62
CHMP4BP1P59074 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 TFAMP1-201ENST00000412727 736 ntBASIC18.95■□□□□ 0.62
CHMP4BP1P59074 KRT18P32-201ENST00000424695 1287 ntBASIC18.95■□□□□ 0.62
CHMP4BP1P59074 ADH5P3-201ENST00000433842 1137 ntBASIC18.95■□□□□ 0.62
CHMP4BP1P59074 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 FAM86C2P-203ENST00000528684 1004 ntBASIC18.95■□□□□ 0.62
CHMP4BP1P59074 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 DUX4L27-201ENST00000554796 1261 ntBASIC18.95■□□□□ 0.62
CHMP4BP1P59074 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 AC005498.2-205ENST00000593218 784 ntBASIC18.95■□□□□ 0.62
CHMP4BP1P59074 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP4BP1P59074 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 BCRP1-201ENST00000444246 691 ntBASIC18.94■□□□□ 0.62
CHMP4BP1P59074 AC093214.1-201ENST00000511688 1107 ntBASIC18.94■□□□□ 0.62
CHMP4BP1P59074 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 AL135744.1-201ENST00000565098 629 ntBASIC18.94■□□□□ 0.62
CHMP4BP1P59074 MIR4515-201ENST00000584082 81 ntBASIC18.94■□□□□ 0.62
CHMP4BP1P59074 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMP4BP1P59074 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms