Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 CROCCP2-202ENST00000412962 2773 ntBASIC20.84■□□□□ 0.93
KCNQ4P56696 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
KCNQ4P56696 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.84■□□□□ 0.93
KCNQ4P56696 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.84■□□□□ 0.93
KCNQ4P56696 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNQ4P56696 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
KCNQ4P56696 GOLGA2P4-201ENST00000441462 777 ntBASIC20.84■□□□□ 0.93
KCNQ4P56696 AC104596.2-201ENST00000512793 793 ntBASIC20.84■□□□□ 0.93
KCNQ4P56696 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNQ4P56696 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNQ4P56696 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 TIMM17BP1-201ENST00000545713 516 ntBASIC20.84■□□□□ 0.93
KCNQ4P56696 AC074044.1-201ENST00000609673 707 ntBASIC20.84■□□□□ 0.93
KCNQ4P56696 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
KCNQ4P56696 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
KCNQ4P56696 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNQ4P56696 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 AL136982.4-201ENST00000437689 1740 ntBASIC20.84■□□□□ 0.93
KCNQ4P56696 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNQ4P56696 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNQ4P56696 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNQ4P56696 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
KCNQ4P56696 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
KCNQ4P56696 FZD10-202ENST00000539839 3282 ntBASIC20.83■□□□□ 0.93
KCNQ4P56696 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
KCNQ4P56696 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNQ4P56696 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNQ4P56696 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNQ4P56696 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNQ4P56696 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNQ4P56696 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.83■□□□□ 0.93
KCNQ4P56696 AC007551.1-201ENST00000457394 519 ntBASIC20.83■□□□□ 0.93
KCNQ4P56696 MIR5189-201ENST00000577370 114 ntBASIC20.83■□□□□ 0.93
KCNQ4P56696 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.83■□□□□ 0.93
KCNQ4P56696 MIR3615-201ENST00000581999 87 ntBASIC20.83■□□□□ 0.93
KCNQ4P56696 LINC01115-203ENST00000606068 577 ntBASIC20.83■□□□□ 0.93
KCNQ4P56696 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.83■□□□□ 0.93
KCNQ4P56696 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNQ4P56696 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.83■□□□□ 0.93
KCNQ4P56696 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNQ4P56696 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNQ4P56696 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
KCNQ4P56696 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNQ4P56696 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
KCNQ4P56696 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNQ4P56696 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNQ4P56696 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNQ4P56696 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNQ4P56696 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ4P56696 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.82■□□□□ 0.92
KCNQ4P56696 TUBB8P12-201ENST00000308911 1335 ntBASIC20.82■□□□□ 0.92
KCNQ4P56696 TUBB7P-202ENST00000428444 1305 ntBASIC20.82■□□□□ 0.92
KCNQ4P56696 TUBB8P7-204ENST00000567960 1332 ntBASIC20.82■□□□□ 0.92
KCNQ4P56696 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ4P56696 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ4P56696 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ4P56696 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.82■□□□□ 0.92
KCNQ4P56696 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ4P56696 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNQ4P56696 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.82■□□□□ 0.92
KCNQ4P56696 RN7SL399P-201ENST00000471648 279 ntBASIC20.82■□□□□ 0.92
KCNQ4P56696 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNQ4P56696 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.82■□□□□ 0.92
KCNQ4P56696 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNQ4P56696 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNQ4P56696 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.82■□□□□ 0.92
KCNQ4P56696 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ4P56696 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNQ4P56696 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.82■□□□□ 0.92
KCNQ4P56696 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNQ4P56696 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNQ4P56696 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ4P56696 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ4P56696 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNQ4P56696 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ4P56696 TUBB1P2-201ENST00000422712 1306 ntBASIC20.81■□□□□ 0.92
KCNQ4P56696 TUBB1P1-201ENST00000503144 1300 ntBASIC20.81■□□□□ 0.92
KCNQ4P56696 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ4P56696 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KCNQ4P56696 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ4P56696 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ4P56696 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KCNQ4P56696 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNQ4P56696 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ4P56696 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ4P56696 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ4P56696 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms