Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC4P55056 AL512356.2-201ENST00000546955 174 ntBASIC12.13□□□□□ -0.47
APOC4P55056 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 AC093520.2-201ENST00000561830 333 ntBASIC12.13□□□□□ -0.47
APOC4P55056 AC015911.4-201ENST00000588022 1070 ntBASIC12.13□□□□□ -0.47
APOC4P55056 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC4P55056 AC011467.4-201ENST00000594891 528 ntBASIC12.13□□□□□ -0.47
APOC4P55056 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 AC084121.4-201ENST00000641598 221 ntBASIC12.13□□□□□ -0.47
APOC4P55056 AF228730.8-201ENST00000642140 221 ntBASIC12.13□□□□□ -0.47
APOC4P55056 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC4P55056 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
APOC4P55056 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC4P55056 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC4P55056 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
APOC4P55056 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC4P55056 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 AC139713.2-201ENST00000641328 2723 ntBASIC12.13□□□□□ -0.47
APOC4P55056 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
APOC4P55056 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
APOC4P55056 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC12.12□□□□□ -0.47
APOC4P55056 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.12□□□□□ -0.47
APOC4P55056 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
APOC4P55056 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
APOC4P55056 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
APOC4P55056 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.12□□□□□ -0.47
APOC4P55056 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
APOC4P55056 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.12□□□□□ -0.47
APOC4P55056 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 HLA-J-202ENST00000469281 1241 ntBASIC12.12□□□□□ -0.47
APOC4P55056 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 AC109322.1-201ENST00000524499 1264 ntBASIC12.12□□□□□ -0.47
APOC4P55056 SLC25A39P2-201ENST00000537614 270 ntBASIC12.12□□□□□ -0.47
APOC4P55056 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.12□□□□□ -0.47
APOC4P55056 LINC01225-203ENST00000563550 1244 ntBASIC12.12□□□□□ -0.47
APOC4P55056 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.12□□□□□ -0.47
APOC4P55056 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.12□□□□□ -0.47
APOC4P55056 MIR6080-201ENST00000617359 66 ntBASIC12.12□□□□□ -0.47
APOC4P55056 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
APOC4P55056 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
APOC4P55056 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
APOC4P55056 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.12□□□□□ -0.47
APOC4P55056 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC4P55056 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms