Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RAD23BP54727 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD23BP54727 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD23BP54727 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAD23BP54727 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD23BP54727 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.72■□□□□ 0.43
RAD23BP54727 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAD23BP54727 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD23BP54727 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD23BP54727 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAD23BP54727 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 GPAA1P2-202ENST00000606848 1787 ntBASIC17.71■□□□□ 0.43
RAD23BP54727 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.71■□□□□ 0.43
RAD23BP54727 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.71■□□□□ 0.43
RAD23BP54727 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.71■□□□□ 0.43
RAD23BP54727 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.71■□□□□ 0.43
RAD23BP54727 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
RAD23BP54727 AC099522.2-201ENST00000607001 744 ntBASIC17.71■□□□□ 0.43
RAD23BP54727 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RAD23BP54727 AC092902.6-201ENST00000641783 218 ntBASIC17.71■□□□□ 0.43
RAD23BP54727 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
RAD23BP54727 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.71■□□□□ 0.43
RAD23BP54727 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.71■□□□□ 0.43
RAD23BP54727 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAD23BP54727 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.71■□□□□ 0.42
RAD23BP54727 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RAD23BP54727 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.71■□□□□ 0.42
RAD23BP54727 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
RAD23BP54727 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
RAD23BP54727 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
RAD23BP54727 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAD23BP54727 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 AC008741.2-201ENST00000612792 3115 ntBASIC17.7■□□□□ 0.42
RAD23BP54727 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAD23BP54727 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RAD23BP54727 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 AC002056.1-201ENST00000395613 760 ntBASIC17.7■□□□□ 0.42
RAD23BP54727 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.7■□□□□ 0.42
RAD23BP54727 FAM58CP-201ENST00000435741 640 ntBASIC17.7■□□□□ 0.42
RAD23BP54727 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.7■□□□□ 0.42
RAD23BP54727 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.7■□□□□ 0.42
RAD23BP54727 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.7■□□□□ 0.42
RAD23BP54727 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.7■□□□□ 0.42
RAD23BP54727 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.7■□□□□ 0.42
RAD23BP54727 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.7■□□□□ 0.42
RAD23BP54727 AL078644.1-201ENST00000609881 752 ntBASIC17.7■□□□□ 0.42
RAD23BP54727 C20orf181-201ENST00000623918 480 ntBASIC17.7■□□□□ 0.42
RAD23BP54727 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 ALOX12P2-203ENST00000570921 1945 ntBASIC17.7■□□□□ 0.42
RAD23BP54727 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAD23BP54727 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAD23BP54727 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD23BP54727 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
RAD23BP54727 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.69■□□□□ 0.42
RAD23BP54727 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.69■□□□□ 0.42
RAD23BP54727 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RAD23BP54727 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD23BP54727 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD23BP54727 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD23BP54727 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms