Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 AC003669.1-201ENST00000334569 611 ntBASIC13.71□□□□□ -0.21
SNCAP37840 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.71□□□□□ -0.21
SNCAP37840 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 AC104076.2-201ENST00000448912 469 ntBASIC13.71□□□□□ -0.21
SNCAP37840 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.71□□□□□ -0.21
SNCAP37840 KRT8P26-201ENST00000534154 1276 ntBASIC13.71□□□□□ -0.21
SNCAP37840 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.71□□□□□ -0.22
SNCAP37840 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
SNCAP37840 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SNCAP37840 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.71□□□□□ -0.22
SNCAP37840 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.71□□□□□ -0.22
SNCAP37840 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.71□□□□□ -0.22
SNCAP37840 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 AC009336.1-201ENST00000608941 1553 ntBASIC13.71□□□□□ -0.22
SNCAP37840 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNCAP37840 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SNCAP37840 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.7□□□□□ -0.22
SNCAP37840 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.7□□□□□ -0.22
SNCAP37840 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.7□□□□□ -0.22
SNCAP37840 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SNCAP37840 GPR89P-201ENST00000407924 1495 ntBASIC13.7□□□□□ -0.22
SNCAP37840 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
SNCAP37840 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.7□□□□□ -0.22
SNCAP37840 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.7□□□□□ -0.22
SNCAP37840 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 AC246785.2-201ENST00000432512 513 ntBASIC13.7□□□□□ -0.22
SNCAP37840 SPDYE13P-201ENST00000445314 798 ntBASIC13.7□□□□□ -0.22
SNCAP37840 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SNCAP37840 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.7□□□□□ -0.22
SNCAP37840 AP002490.2-201ENST00000524791 560 ntBASIC13.7□□□□□ -0.22
SNCAP37840 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.7□□□□□ -0.22
SNCAP37840 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.7□□□□□ -0.22
SNCAP37840 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.7□□□□□ -0.22
SNCAP37840 AL353801.3-201ENST00000609898 542 ntBASIC13.7□□□□□ -0.22
SNCAP37840 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SNCAP37840 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.7□□□□□ -0.22
SNCAP37840 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SNCAP37840 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.7□□□□□ -0.22
SNCAP37840 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.7□□□□□ -0.22
SNCAP37840 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SNCAP37840 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
SNCAP37840 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNCAP37840 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.7□□□□□ -0.22
SNCAP37840 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 AL135999.2-201ENST00000622438 1686 ntBASIC13.69□□□□□ -0.22
SNCAP37840 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.69□□□□□ -0.22
SNCAP37840 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SNCAP37840 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 AL353593.2-201ENST00000602529 1483 ntBASIC13.69□□□□□ -0.22
SNCAP37840 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SNCAP37840 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNCAP37840 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
SNCAP37840 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms