Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.16■□□□□ 0.66
ERCC3P19447 AC142381.1-201ENST00000426099 345 ntBASIC19.16■□□□□ 0.66
ERCC3P19447 AC244107.1-201ENST00000442033 332 ntBASIC19.16■□□□□ 0.66
ERCC3P19447 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.16■□□□□ 0.66
ERCC3P19447 MIR4492-201ENST00000581627 80 ntBASIC19.16■□□□□ 0.66
ERCC3P19447 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.16■□□□□ 0.66
ERCC3P19447 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.16■□□□□ 0.66
ERCC3P19447 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC3P19447 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC3P19447 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ERCC3P19447 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.16■□□□□ 0.66
ERCC3P19447 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC3P19447 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC3P19447 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC3P19447 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC3P19447 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.16■□□□□ 0.66
ERCC3P19447 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC3P19447 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC3P19447 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC3P19447 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC3P19447 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ERCC3P19447 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 LINC00895-201ENST00000629028 1637 ntBASIC19.15■□□□□ 0.66
ERCC3P19447 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC3P19447 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ERCC3P19447 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
ERCC3P19447 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ERCC3P19447 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ERCC3P19447 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.15■□□□□ 0.66
ERCC3P19447 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC3P19447 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.15■□□□□ 0.66
ERCC3P19447 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.15■□□□□ 0.66
ERCC3P19447 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 AC021097.1-201ENST00000607902 574 ntBASIC19.15■□□□□ 0.66
ERCC3P19447 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.15■□□□□ 0.66
ERCC3P19447 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ERCC3P19447 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC3P19447 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC3P19447 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC3P19447 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC3P19447 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC3P19447 AC124067.4-201ENST00000519691 2379 ntBASIC19.14■□□□□ 0.66
ERCC3P19447 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC3P19447 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
ERCC3P19447 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC3P19447 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.14■□□□□ 0.65
ERCC3P19447 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.14■□□□□ 0.65
ERCC3P19447 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.14■□□□□ 0.65
ERCC3P19447 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.14■□□□□ 0.65
ERCC3P19447 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC3P19447 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.14■□□□□ 0.65
ERCC3P19447 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.14■□□□□ 0.65
ERCC3P19447 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.14■□□□□ 0.65
ERCC3P19447 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.14■□□□□ 0.65
ERCC3P19447 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.14■□□□□ 0.65
ERCC3P19447 AC012645.4-201ENST00000610691 1061 ntBASIC19.14■□□□□ 0.65
ERCC3P19447 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.14■□□□□ 0.65
ERCC3P19447 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC3P19447 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC3P19447 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC3P19447 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC3P19447 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC3P19447 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC3P19447 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC3P19447 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC3P19447 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC3P19447 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ERCC3P19447 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC3P19447 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC3P19447 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC3P19447 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC3P19447 AC241585.1-201ENST00000433527 519 ntBASIC19.13■□□□□ 0.65
ERCC3P19447 AC004890.2-204ENST00000481968 304 ntBASIC19.13■□□□□ 0.65
ERCC3P19447 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.13■□□□□ 0.65
ERCC3P19447 AC105233.2-201ENST00000523697 349 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms