Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TOP1P11387 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.45■□□□□ 0.7
TOP1P11387 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TOP1P11387 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.45■□□□□ 0.7
TOP1P11387 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TOP1P11387 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 PCDHA14-201ENST00000506751 2298 ntBASIC19.44■□□□□ 0.7
TOP1P11387 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.44■□□□□ 0.7
TOP1P11387 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 PMS2P2-201ENST00000425039 1128 ntBASIC19.44■□□□□ 0.7
TOP1P11387 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.44■□□□□ 0.7
TOP1P11387 KRT18P34-201ENST00000488218 1270 ntBASIC19.44■□□□□ 0.7
TOP1P11387 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.44■□□□□ 0.7
TOP1P11387 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
TOP1P11387 KRT8P23-201ENST00000560090 1207 ntBASIC19.44■□□□□ 0.7
TOP1P11387 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.44■□□□□ 0.7
TOP1P11387 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.44■□□□□ 0.7
TOP1P11387 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TOP1P11387 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOP1P11387 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TOP1P11387 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TOP1P11387 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TOP1P11387 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.43■□□□□ 0.7
TOP1P11387 PCDHB19P-201ENST00000570871 2371 ntBASIC19.43■□□□□ 0.7
TOP1P11387 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TOP1P11387 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.43■□□□□ 0.7
TOP1P11387 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.43■□□□□ 0.7
TOP1P11387 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.43■□□□□ 0.7
TOP1P11387 AL512652.2-201ENST00000625156 1716 ntBASIC19.43■□□□□ 0.7
TOP1P11387 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.43■□□□□ 0.7
TOP1P11387 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
TOP1P11387 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TOP1P11387 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 AL139400.1-201ENST00000366220 510 ntBASIC19.43■□□□□ 0.7
TOP1P11387 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.43■□□□□ 0.7
TOP1P11387 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.43■□□□□ 0.7
TOP1P11387 TSEN15P1-201ENST00000423257 515 ntBASIC19.43■□□□□ 0.7
TOP1P11387 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.43■□□□□ 0.7
TOP1P11387 IGHV3-62-201ENST00000520057 340 ntBASIC19.43■□□□□ 0.7
TOP1P11387 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.43■□□□□ 0.7
TOP1P11387 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.43■□□□□ 0.7
TOP1P11387 AC008267.7-201ENST00000624570 1194 ntBASIC19.43■□□□□ 0.7
TOP1P11387 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TOP1P11387 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
TOP1P11387 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.43■□□□□ 0.7
TOP1P11387 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.43■□□□□ 0.7
TOP1P11387 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 AL603756.1-201ENST00000606511 2163 ntBASIC19.43■□□□□ 0.7
TOP1P11387 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.43■□□□□ 0.7
TOP1P11387 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TOP1P11387 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms