Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 AL138918.1-201ENST00000568306 659 ntBASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 FO538757.1-201ENST00000623083 1397 ntBASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40ALP0C0E4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 CROCCP2-202ENST00000412962 2773 ntBASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 AL035633.1-201ENST00000406139 838 ntBASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 TREML5P-201ENST00000421694 576 ntBASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 AC006277.1-201ENST00000624348 1610 ntBASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
RAB40ALP0C0E4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 COX20P2-201ENST00000452636 358 ntBASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms