Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PFDN1O60925 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.79□□□□□ -0.04
PFDN1O60925 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
PFDN1O60925 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
PFDN1O60925 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PFDN1O60925 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PFDN1O60925 MIR149-201ENST00000384879 89 ntBASIC14.79□□□□□ -0.04
PFDN1O60925 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PFDN1O60925 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.79□□□□□ -0.04
PFDN1O60925 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.79□□□□□ -0.04
PFDN1O60925 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PFDN1O60925 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.79□□□□□ -0.04
PFDN1O60925 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 PBX2P1-201ENST00000493219 1291 ntBASIC14.79□□□□□ -0.04
PFDN1O60925 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.79□□□□□ -0.04
PFDN1O60925 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.79□□□□□ -0.04
PFDN1O60925 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PFDN1O60925 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PFDN1O60925 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.79□□□□□ -0.04
PFDN1O60925 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PFDN1O60925 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PFDN1O60925 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PFDN1O60925 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PFDN1O60925 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PFDN1O60925 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PFDN1O60925 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 AC020658.6-201ENST00000623564 1870 ntBASIC14.78□□□□□ -0.04
PFDN1O60925 AC112504.1-201ENST00000623415 1841 ntBASIC14.78□□□□□ -0.04
PFDN1O60925 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PFDN1O60925 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.78□□□□□ -0.04
PFDN1O60925 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 AL355472.2-201ENST00000422958 438 ntBASIC14.78□□□□□ -0.04
PFDN1O60925 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.78□□□□□ -0.04
PFDN1O60925 AF213884.3-201ENST00000563833 479 ntBASIC14.78□□□□□ -0.04
PFDN1O60925 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.78□□□□□ -0.04
PFDN1O60925 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
PFDN1O60925 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.78□□□□□ -0.04
PFDN1O60925 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.78□□□□□ -0.04
PFDN1O60925 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PFDN1O60925 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PFDN1O60925 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.77□□□□□ -0.04
PFDN1O60925 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.77□□□□□ -0.04
PFDN1O60925 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PFDN1O60925 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms