Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC7O00311 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC7O00311 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC7O00311 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC7O00311 LINC01144-201ENST00000626198 1710 ntBASIC16.28■□□□□ 0.2
CDC7O00311 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC7O00311 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC7O00311 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC7O00311 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CDC7O00311 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC7O00311 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 CRYGEP-201ENST00000412192 528 ntBASIC16.27■□□□□ 0.2
CDC7O00311 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CDC7O00311 HCG4B-203ENST00000450128 991 ntBASIC16.27■□□□□ 0.2
CDC7O00311 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC7O00311 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CDC7O00311 AL662844.1-201ENST00000546340 181 ntBASIC16.27■□□□□ 0.2
CDC7O00311 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CDC7O00311 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.27■□□□□ 0.2
CDC7O00311 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.27■□□□□ 0.2
CDC7O00311 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC7O00311 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC7O00311 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC7O00311 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC7O00311 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDC7O00311 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC7O00311 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC7O00311 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC7O00311 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.27■□□□□ 0.19
CDC7O00311 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC7O00311 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.27■□□□□ 0.19
CDC7O00311 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC7O00311 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDC7O00311 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.27■□□□□ 0.19
CDC7O00311 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDC7O00311 REXO1L8P-201ENST00000604378 1897 ntBASIC16.27■□□□□ 0.19
CDC7O00311 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.27■□□□□ 0.19
CDC7O00311 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CDC7O00311 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC7O00311 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 AC008894.3-201ENST00000624324 3103 ntBASIC16.26■□□□□ 0.19
CDC7O00311 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC7O00311 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CDC7O00311 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDC7O00311 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC7O00311 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.26■□□□□ 0.19
CDC7O00311 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC7O00311 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC7O00311 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDC7O00311 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC7O00311 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 RNU1-129P-201ENST00000384064 167 ntBASIC16.26■□□□□ 0.19
CDC7O00311 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC7O00311 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDC7O00311 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.26■□□□□ 0.19
CDC7O00311 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 U1.21-201ENST00000580816 167 ntBASIC16.26■□□□□ 0.19
CDC7O00311 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.26■□□□□ 0.19
CDC7O00311 AC010507.1-201ENST00000633895 436 ntBASIC16.26■□□□□ 0.19
CDC7O00311 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC7O00311 CICP6-201ENST00000457191 2729 ntBASIC16.26■□□□□ 0.19
CDC7O00311 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC7O00311 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 AC006449.6-201ENST00000612330 2296 ntBASIC16.26■□□□□ 0.19
CDC7O00311 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDC7O00311 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC7O00311 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms