Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AC002056.1-201ENST00000395613 760 ntBASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AL590627.1-203ENST00000421194 1026 ntBASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AL603832.2-201ENST00000566195 2125 ntBASIC14.64□□□□□ -0.07
NPIPB4C9JG80 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AL365330.1-201ENST00000607459 531 ntBASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 FAM197Y3-203ENST00000618346 717 ntBASIC14.64□□□□□ -0.07
NPIPB4C9JG80 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 WASH6P-202ENST00000359512 1437 ntBASIC14.64□□□□□ -0.07
NPIPB4C9JG80 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 AC018695.7-201ENST00000624587 2492 ntBASIC14.64□□□□□ -0.07
NPIPB4C9JG80 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 AC074386.1-202ENST00000463561 864 ntBASIC14.63□□□□□ -0.07
NPIPB4C9JG80 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 RNA5SP416-201ENST00000516838 111 ntBASIC14.63□□□□□ -0.07
NPIPB4C9JG80 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 AC106730.1-201ENST00000566722 1090 ntBASIC14.63□□□□□ -0.07
NPIPB4C9JG80 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 AC027601.4-201ENST00000611259 610 ntBASIC14.63□□□□□ -0.07
NPIPB4C9JG80 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPB4C9JG80 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 AC016027.1-202ENST00000607927 1699 ntBASIC14.62□□□□□ -0.07
NPIPB4C9JG80 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 KRT18P2-201ENST00000447938 1258 ntBASIC14.62□□□□□ -0.07
NPIPB4C9JG80 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms