Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NOC2LP2-201ENST00000407594 1944 ntBASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 AL589987.1-201ENST00000453380 819 ntBASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC2Q9Y5Z7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 TMEM14DP-201ENST00000422205 345 ntBASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 MIR6069-201ENST00000620069 79 ntBASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC2Q9Y5Z7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 AL512652.2-201ENST00000625156 1716 ntBASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 AC098850.1-201ENST00000419919 790 ntBASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 AL512343.1-201ENST00000605837 169 ntBASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 AL139011.1-202ENST00000642063 584 ntBASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC2Q9Y5Z7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
HCFC2Q9Y5Z7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms