Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 ELL2P1-201ENST00000413990 1906 ntBASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 ARL4AP4-201ENST00000434170 518 ntBASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 POU5F1P6-201ENST00000466990 990 ntBASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 YBX1P5-201ENST00000509441 847 ntBASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 AL161645.1-201ENST00000622716 1255 ntBASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 AC092902.6-201ENST00000641783 218 ntBASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 AL671710.1-201ENST00000610245 2349 ntBASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRDM9Q9NQV7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 AC092474.2-201ENST00000424288 719 ntBASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 MIR4469-201ENST00000583919 79 ntBASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRDM9Q9NQV7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms