Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 RCN1P2-201ENST00000398357 915 ntBASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 DUX4L17-201ENST00000557360 1267 ntBASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.26□□□□□ -0.13
CMSS1Q9BQ75 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 MIR600HG-201ENST00000449175 5984 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 KRT8P49-201ENST00000604166 1432 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 AC005332.1-201ENST00000577698 1310 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 AP002414.1-201ENST00000391405 1147 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 SPDYE21P-201ENST00000413323 827 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 LINC00982-205ENST00000420957 435 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 TSSC2-201ENST00000450217 709 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 KRT17P6-201ENST00000453795 1220 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 AC104640.1-201ENST00000562617 2109 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 BNIP3P18-201ENST00000593976 575 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 AP000867.4-201ENST00000641616 219 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 NSUN5P1-202ENST00000421140 1535 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 NSUN5P2-203ENST00000457352 1529 ntBASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.25□□□□□ -0.13
CMSS1Q9BQ75 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CMSS1Q9BQ75 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CMSS1Q9BQ75 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CMSS1Q9BQ75 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CMSS1Q9BQ75 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CMSS1Q9BQ75 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CMSS1Q9BQ75 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CMSS1Q9BQ75 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CMSS1Q9BQ75 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CMSS1Q9BQ75 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms