Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 AC073592.8-201ENST00000624126 511 ntBASIC19.37■□□□□ 0.69
TRIM47Q96LD4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 AC022144.1-201ENST00000602255 1580 ntBASIC19.36■□□□□ 0.69
TRIM47Q96LD4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 U91328.1-201ENST00000437528 223 ntBASIC19.36■□□□□ 0.69
TRIM47Q96LD4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.36■□□□□ 0.69
TRIM47Q96LD4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM47Q96LD4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 CU639417.3-201ENST00000624240 1404 ntBASIC19.35■□□□□ 0.69
TRIM47Q96LD4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM47Q96LD4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 NKILA-202ENST00000614771 2598 ntBASIC19.34■□□□□ 0.69
TRIM47Q96LD4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM47Q96LD4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms