Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC28Q96AY4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.5■□□□□ 0.23
TTC28Q96AY4 AL512430.1-201ENST00000392575 860 ntBASIC16.5■□□□□ 0.23
TTC28Q96AY4 RN7SL8P-201ENST00000461771 266 ntBASIC16.5■□□□□ 0.23
TTC28Q96AY4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 AL451050.2-201ENST00000606967 682 ntBASIC16.5■□□□□ 0.23
TTC28Q96AY4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 INTS4P2-202ENST00000614726 2019 ntBASIC16.5■□□□□ 0.23
TTC28Q96AY4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 AC234782.1-201ENST00000451950 919 ntBASIC16.5■□□□□ 0.23
TTC28Q96AY4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 RN7SL596P-201ENST00000582123 288 ntBASIC16.5■□□□□ 0.23
TTC28Q96AY4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.5■□□□□ 0.23
TTC28Q96AY4 AL805961.1-201ENST00000642026 753 ntBASIC16.5■□□□□ 0.23
TTC28Q96AY4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC28Q96AY4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 HSPB1P2-201ENST00000448722 546 ntBASIC16.49■□□□□ 0.23
TTC28Q96AY4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 AC025181.2-201ENST00000606994 802 ntBASIC16.49■□□□□ 0.23
TTC28Q96AY4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC28Q96AY4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TTC28Q96AY4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.48■□□□□ 0.23
TTC28Q96AY4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 MPDU1-223ENST00000582151 728 ntBASIC16.48■□□□□ 0.23
TTC28Q96AY4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.48■□□□□ 0.23
TTC28Q96AY4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC28Q96AY4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TTC28Q96AY4 AC097065.1-201ENST00000425737 517 ntBASIC16.47■□□□□ 0.23
TTC28Q96AY4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.47■□□□□ 0.23
TTC28Q96AY4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.47■□□□□ 0.23
TTC28Q96AY4 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.47■□□□□ 0.23
TTC28Q96AY4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.47■□□□□ 0.23
TTC28Q96AY4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.47■□□□□ 0.23
TTC28Q96AY4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms