Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.27■□□□□ 0.84
RPGRQ92834 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RPGRQ92834 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RPGRQ92834 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.27■□□□□ 0.84
RPGRQ92834 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.27■□□□□ 0.84
RPGRQ92834 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPGRQ92834 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 SDHAP3-202ENST00000515467 728 ntBASIC20.27■□□□□ 0.84
RPGRQ92834 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.27■□□□□ 0.84
RPGRQ92834 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.27■□□□□ 0.84
RPGRQ92834 TPRX2P-201ENST00000535362 881 ntBASIC20.27■□□□□ 0.84
RPGRQ92834 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.27■□□□□ 0.84
RPGRQ92834 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.27■□□□□ 0.84
RPGRQ92834 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.27■□□□□ 0.84
RPGRQ92834 AC004461.2-201ENST00000629517 803 ntBASIC20.27■□□□□ 0.84
RPGRQ92834 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRQ92834 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPGRQ92834 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.27■□□□□ 0.83
RPGRQ92834 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RPGRQ92834 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RPGRQ92834 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPGRQ92834 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPGRQ92834 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.27■□□□□ 0.83
RPGRQ92834 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPGRQ92834 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPGRQ92834 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.26■□□□□ 0.83
RPGRQ92834 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.26■□□□□ 0.83
RPGRQ92834 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.26■□□□□ 0.83
RPGRQ92834 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.26■□□□□ 0.83
RPGRQ92834 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.26■□□□□ 0.83
RPGRQ92834 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
RPGRQ92834 SPDYE17-201ENST00000412399 783 ntBASIC20.26■□□□□ 0.83
RPGRQ92834 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RPGRQ92834 ACA64.2-201ENST00000459014 129 ntBASIC20.26■□□□□ 0.83
RPGRQ92834 AP002490.2-201ENST00000524791 560 ntBASIC20.26■□□□□ 0.83
RPGRQ92834 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.26■□□□□ 0.83
RPGRQ92834 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
RPGRQ92834 AL512652.2-201ENST00000625156 1716 ntBASIC20.26■□□□□ 0.83
RPGRQ92834 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RPGRQ92834 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RPGRQ92834 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRQ92834 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.25■□□□□ 0.83
RPGRQ92834 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRQ92834 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
RPGRQ92834 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RPGRQ92834 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RPGRQ92834 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 AC079776.1-201ENST00000401540 1152 ntBASIC20.25■□□□□ 0.83
RPGRQ92834 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.25■□□□□ 0.83
RPGRQ92834 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRQ92834 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRQ92834 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.25■□□□□ 0.83
RPGRQ92834 KRT17P8-201ENST00000540749 863 ntBASIC20.25■□□□□ 0.83
RPGRQ92834 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.25■□□□□ 0.83
RPGRQ92834 MIR6069-201ENST00000620069 79 ntBASIC20.25■□□□□ 0.83
RPGRQ92834 AL109936.8-201ENST00000641772 604 ntBASIC20.25■□□□□ 0.83
RPGRQ92834 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.25■□□□□ 0.83
RPGRQ92834 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRQ92834 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.25■□□□□ 0.83
RPGRQ92834 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RPGRQ92834 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RPGRQ92834 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms