Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 TMCO5B-205ENST00000530020 894 ntBASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 AL590235.1-201ENST00000564650 861 ntBASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 MIR4313-201ENST00000580760 101 ntBASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 AC242376.2-201ENST00000619355 883 ntBASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
SYNE2Q8WXH0 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AL354877.1-201ENST00000424412 413 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 TPT1P11-201ENST00000458482 498 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AC020922.3-201ENST00000595064 547 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 GMCL1P1-201ENST00000463439 1581 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AL135999.2-201ENST00000622438 1686 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 BAATP1-201ENST00000412284 1225 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AC136604.1-202ENST00000425471 771 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 MARK2P5-201ENST00000507649 634 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AC103988.2-201ENST00000561804 725 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AC018846.1-201ENST00000568231 183 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 MAGEA7P-201ENST00000436482 942 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 ABCC6P2-201ENST00000526069 590 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 NF1P11-201ENST00000621292 1282 ntBASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE2Q8WXH0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SYNE2Q8WXH0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms