Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AL671710.1-201ENST00000610245 2349 ntBASIC12.45□□□□□ -0.42
NUP35Q8NFH5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AC026748.1-201ENST00000624349 3251 ntBASIC12.45□□□□□ -0.42
NUP35Q8NFH5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 INGX-201ENST00000359239 846 ntBASIC12.44□□□□□ -0.42
NUP35Q8NFH5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 CD99P1-205ENST00000527459 561 ntBASIC12.44□□□□□ -0.42
NUP35Q8NFH5 AP003071.4-201ENST00000562276 1284 ntBASIC12.44□□□□□ -0.42
NUP35Q8NFH5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 AC069224.1-201ENST00000566372 1715 ntBASIC12.44□□□□□ -0.42
NUP35Q8NFH5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 AL109954.1-202ENST00000564051 2148 ntBASIC12.44□□□□□ -0.42
NUP35Q8NFH5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 CICP24-201ENST00000605464 2705 ntBASIC12.44□□□□□ -0.42
NUP35Q8NFH5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 AC106881.1-201ENST00000605849 3329 ntBASIC12.44□□□□□ -0.42
NUP35Q8NFH5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.44□□□□□ -0.42
NUP35Q8NFH5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms