Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 CROCCP2-202ENST00000412962 2773 ntBASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 AL391825.1-201ENST00000457671 1364 ntBASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 SLC25A1P3-201ENST00000395415 828 ntBASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 AL844908.2-201ENST00000609461 460 ntBASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 AD000864.1-201ENST00000624076 2295 ntBASIC16.79■□□□□ 0.28
SYNPOQ8N3V7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 AC087499.6-201ENST00000411576 835 ntBASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 RPL37AP1-201ENST00000412502 279 ntBASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 ATP5G2P4-201ENST00000442175 420 ntBASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 AL132655.2-201ENST00000596276 594 ntBASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 AC008738.7-201ENST00000609744 511 ntBASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.78■□□□□ 0.28
SYNPOQ8N3V7 AC099398.1-201ENST00000567919 2776 ntBASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 ARSEP1-201ENST00000420443 635 ntBASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 HLA-V-201ENST00000429037 534 ntBASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 DFFBP1-201ENST00000433250 979 ntBASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 MTND6P24-201ENST00000440466 518 ntBASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 GPR53P-205ENST00000457298 1084 ntBASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms