Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 AC027369.6-201ENST00000525520 931 ntBASIC16.83■□□□□ 0.28
PGBD3Q8N328 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.83■□□□□ 0.28
PGBD3Q8N328 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.83■□□□□ 0.28
PGBD3Q8N328 AC016396.2-201ENST00000562575 1417 ntBASIC16.83■□□□□ 0.28
PGBD3Q8N328 MIR3909-201ENST00000579518 119 ntBASIC16.83■□□□□ 0.28
PGBD3Q8N328 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PGBD3Q8N328 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.83■□□□□ 0.28
PGBD3Q8N328 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.83■□□□□ 0.28
PGBD3Q8N328 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD3Q8N328 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD3Q8N328 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.83■□□□□ 0.28
PGBD3Q8N328 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD3Q8N328 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD3Q8N328 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
PGBD3Q8N328 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.83■□□□□ 0.28
PGBD3Q8N328 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 MIR346-201ENST00000362234 95 ntBASIC16.82■□□□□ 0.28
PGBD3Q8N328 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 MIR661-201ENST00000384842 89 ntBASIC16.82■□□□□ 0.28
PGBD3Q8N328 FAM207CP-201ENST00000443486 507 ntBASIC16.82■□□□□ 0.28
PGBD3Q8N328 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 AL138918.1-201ENST00000568306 659 ntBASIC16.82■□□□□ 0.28
PGBD3Q8N328 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD3Q8N328 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD3Q8N328 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 AC241585.1-201ENST00000433527 519 ntBASIC16.81■□□□□ 0.28
PGBD3Q8N328 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 KRT18P34-201ENST00000488218 1270 ntBASIC16.81■□□□□ 0.28
PGBD3Q8N328 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 CYP2A7P1-201ENST00000595391 815 ntBASIC16.81■□□□□ 0.28
PGBD3Q8N328 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 AC021097.1-201ENST00000607902 574 ntBASIC16.81■□□□□ 0.28
PGBD3Q8N328 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PGBD3Q8N328 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD3Q8N328 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.8■□□□□ 0.28
PGBD3Q8N328 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.8■□□□□ 0.28
PGBD3Q8N328 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD3Q8N328 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms